Everything
All Classes
PyML.classifiers.baseClassifiers.Classifier
PyML.classifiers.baseClassifiers.IteratorClassifier
PyML.classifiers.composite.AggregateClassifier
PyML.classifiers.composite.Chain
PyML.classifiers.composite.CompositeClassifier
PyML.classifiers.composite.FeatureSelect
PyML.classifiers.composite.FeatureSelectAll
PyML.classifiers.ext.cgist.DoubleVector
PyML.classifiers.ext.cgist.IntVector
PyML.classifiers.ext.cgist.PySwigIterator
PyML.classifiers.ext.csmo.DoubleVector
PyML.classifiers.ext.csmo.IntVector
PyML.classifiers.ext.csmo.PySwigIterator
PyML.classifiers.ext.csvmodel.DoubleVector
PyML.classifiers.ext.csvmodel.IntVector
PyML.classifiers.ext.csvmodel.LinearSVModel
PyML.classifiers.ext.csvmodel.LinearSparseSVModel
PyML.classifiers.ext.csvmodel.PySwigIterator
PyML.classifiers.ext.csvmodel.SVModel
PyML.classifiers.ext.knn.DoubleVector
PyML.classifiers.ext.knn.IntVector
PyML.classifiers.ext.knn.KNN
PyML.classifiers.ext.knn.PySwigIterator
PyML.classifiers.ext.libsvm.DecisionFunction
PyML.classifiers.ext.libsvm.PySwigIterator
PyML.classifiers.ext.libsvm.doubleArray
PyML.classifiers.ext.libsvm.intArray
PyML.classifiers.ext.libsvm.svm_node
PyML.classifiers.ext.libsvm.svm_parameter
PyML.classifiers.ext.libsvm.svm_problem
PyML.classifiers.knn.KNN
PyML.classifiers.libsvmWrap.svmParameter
PyML.classifiers.modelSelection.ModelSelector
PyML.classifiers.modelSelection.Param
PyML.classifiers.modelSelection.ParamGrid
PyML.classifiers.modelSelection.SVMselect
PyML.classifiers.multi.OneAgainstOne
PyML.classifiers.multi.OneAgainstRest
PyML.classifiers.platt.Platt
PyML.classifiers.platt.Platt2
PyML.classifiers.ridgeRegression.RidgeRegression
PyML.classifiers.svm.LinearSVModel
PyML.classifiers.svm.OneClassSVM
PyML.classifiers.svm.SVC
PyML.classifiers.svm.SVM
PyML.classifiers.svm.SVModel
PyML.classifiers.svm.SVR
PyML.classifiers.template.Template
PyML.containers.aggregate.Aggregate
PyML.containers.aggregate.DataAggregate
PyML.containers.baseDatasets.BaseDataSet
PyML.containers.baseDatasets.BaseVectorDataSet
PyML.containers.baseDatasets.WrapperDataSet
PyML.containers.datafunc.PySparseDataSet
PyML.containers.datafunc.PyVectorDataSet
PyML.containers.ext.caggregate.Aggregate
PyML.containers.ext.caggregate.DataSet
PyML.containers.ext.caggregate.DoubleVector
PyML.containers.ext.caggregate.IntVector
PyML.containers.ext.caggregate.PySwigIterator
PyML.containers.ext.ckernel.Cosine
PyML.containers.ext.ckernel.DoubleVector
PyML.containers.ext.ckernel.FloatVector
PyML.containers.ext.ckernel.Gaussian
PyML.containers.ext.ckernel.IntVector
PyML.containers.ext.ckernel.Kernel
PyML.containers.ext.ckernel.KernelMatrix
PyML.containers.ext.ckernel.Linear
PyML.containers.ext.ckernel.Polynomial
PyML.containers.ext.ckernel.PySwigIterator
PyML.containers.ext.ckerneldata.DataSet
PyML.containers.ext.ckerneldata.DoubleVector
PyML.containers.ext.ckerneldata.FloatVector
PyML.containers.ext.ckerneldata.IntVector
PyML.containers.ext.ckerneldata.KernelData
PyML.containers.ext.ckerneldata.PySwigIterator
PyML.containers.ext.cpairdataset.DataSet
PyML.containers.ext.cpairdataset.DoubleVector
PyML.containers.ext.cpairdataset.IntVector
PyML.containers.ext.cpairdataset.PairDataSet
PyML.containers.ext.cpairdataset.PairDataSetOrd
PyML.containers.ext.cpairdataset.PairDataSetSum
PyML.containers.ext.cpairdataset.PySwigIterator
PyML.containers.ext.csequencedata.DataSet
PyML.containers.ext.csequencedata.DoubleVector
PyML.containers.ext.csequencedata.IntVector
PyML.containers.ext.csequencedata.LongVector
PyML.containers.ext.csequencedata.PySwigIterator
PyML.containers.ext.csequencedata.SequenceData
PyML.containers.ext.csequencedata.StringVector
PyML.containers.ext.csparsedataset.DataSet
PyML.containers.ext.csparsedataset.DoubleVector
PyML.containers.ext.csparsedataset.FloatVector
PyML.containers.ext.csparsedataset.IntVector
PyML.containers.ext.csparsedataset.LongVector
PyML.containers.ext.csparsedataset.PySwigIterator
PyML.containers.ext.csparsedataset.SparseDataSet
PyML.containers.ext.csparsedataset.StringVector
PyML.containers.ext.csparsedataset.doubleArray
PyML.containers.ext.csparsedataset.intArray
PyML.containers.ext.csparsefeaturevector.Feature
PyML.containers.ext.csparsefeaturevector.SparseFeatureVector
PyML.containers.ext.cstringkernel.DoubleVector
PyML.containers.ext.cstringkernel.IntVector
PyML.containers.ext.cstringkernel.LongVector
PyML.containers.ext.cstringkernel.PositionalKmer
PyML.containers.ext.cstringkernel.PySwigIterator
PyML.containers.ext.cstringkernel.StringKernel
PyML.containers.ext.cstringkernel.StringVector
PyML.containers.ext.cvectordataset.DataSet
PyML.containers.ext.cvectordataset.DoubleVector
PyML.containers.ext.cvectordataset.IntVector
PyML.containers.ext.cvectordataset.LongVector
PyML.containers.ext.cvectordataset.PySwigIterator
PyML.containers.ext.cvectordataset.StringVector
PyML.containers.ext.cvectordataset.VectorDataSet
PyML.containers.ker.Cosine
PyML.containers.ker.Gaussian
PyML.containers.ker.Kernel
PyML.containers.ker.Linear
PyML.containers.ker.Polynomial
PyML.containers.kernelData.KernelData
PyML.containers.labels.Labels
PyML.containers.pairData.PairDataSet
PyML.containers.pairData.PairDataSetOrd
PyML.containers.pairData.PairDataSetSum
PyML.containers.pairData.SimplePairDataSet
PyML.containers.parsers.CSVParser
PyML.containers.parsers.Parser
PyML.containers.parsers.SparseParser
PyML.containers.sequenceData.SequenceData
PyML.containers.vectorDatasets.BaseCVectorDataSet
PyML.containers.vectorDatasets.SparseDataSet
PyML.containers.vectorDatasets.VectorDataSet
PyML.evaluators.assess.ClassificationFunctions
PyML.evaluators.assess.ClassificationResults
PyML.evaluators.assess.ClassificationResultsContainer
PyML.evaluators.assess.RegressionResults
PyML.evaluators.assess.RegressionResultsContainer
PyML.evaluators.assess.Results
PyML.evaluators.assess.ResultsContainer
PyML.evaluators.assess.ResultsList
PyML.feature_selection.featsel.BackwardSelector
PyML.feature_selection.featsel.FeatureScore
PyML.feature_selection.featsel.FeatureScorer
PyML.feature_selection.featsel.FeatureSelector
PyML.feature_selection.featsel.Filter
PyML.feature_selection.featsel.MultiplicativeUpdate
PyML.feature_selection.featsel.OneAgainstRestSelect
PyML.feature_selection.featsel.RFE
PyML.feature_selection.featsel.Random
PyML.preproc.preproc.Correlator
PyML.preproc.preproc.Standardizer
All Functions
PyML.classifiers.lazyclass.RF
PyML.classifiers.lazyclass.gaussianSelect
PyML.classifiers.lazyclass.rescale
PyML.classifiers.lazyclass.rescaleGaussian
PyML.classifiers.multi.allOneAgainstRest
PyML.classifiers.svm.loadSVM
PyML.classifiers.svm.runGist
PyML.classifiers.svm.runGradientDescent
PyML.classifiers.svm.runMySMO
PyML.containers.labels.eliminateMultiLabeled
PyML.containers.labels.eliminateSmallClasses
PyML.containers.labels.mergeClasses
PyML.containers.labels.oneAgainstRest
PyML.containers.labels.randomLabels
PyML.containers.parsers.parserDispatcher
PyML.containers.parsers.test
PyML.containers.sequenceData.fastaHeaderHandler
PyML.containers.sequenceData.generateSpectrum
PyML.containers.sequenceData.spectrumData
PyML.datagen.sample.bootstrap
PyML.datagen.sample.sample
PyML.datagen.sample.shuffle
PyML.datagen.sample.splitDataset
PyML.datagen.toydata.gaussianData
PyML.datagen.toydata.multivariate_normal
PyML.datagen.toydata.noisyData
PyML.datagen.toydata.separableData
PyML.datagen.toydata.sineClass
PyML.datagen.toydata.sineData
PyML.demo.demo2d.decisionSurface
PyML.demo.demo2d.getData
PyML.demo.demo2d.pick
PyML.demo.demo2d.scatter
PyML.demo.demo2d.setData
PyML.demo.pyml_test.test
PyML.demo.test.test
PyML.evaluators.assess.confmat
PyML.evaluators.assess.convert
PyML.evaluators.assess.cv
PyML.evaluators.assess.cvFromFile
PyML.evaluators.assess.cvFromFolds
PyML.evaluators.assess.loadResults
PyML.evaluators.assess.loadResults2
PyML.evaluators.assess.loo
PyML.evaluators.assess.makeFolds
PyML.evaluators.assess.nCV
PyML.evaluators.assess.plotROC
PyML.evaluators.assess.plotROC2
PyML.evaluators.assess.plotROCs
PyML.evaluators.assess.roc
PyML.evaluators.assess.saveResultObjects
PyML.evaluators.assess.scatter
PyML.evaluators.assess.significance
PyML.evaluators.assess.stratifiedCV
PyML.evaluators.assess.superConfmat
PyML.evaluators.assess.test
PyML.evaluators.assess.trainTest
PyML.feature_selection.featsel.abundance
PyML.feature_selection.featsel.balancedSucc
PyML.feature_selection.featsel.countDiff
PyML.feature_selection.featsel.eliminateSparseFeatures
PyML.feature_selection.featsel.extractNumFeatures
PyML.feature_selection.featsel.featureCount
PyML.feature_selection.featsel.featureMean
PyML.feature_selection.featsel.featureReport
PyML.feature_selection.featsel.featureStd
PyML.feature_selection.featsel.golub
PyML.feature_selection.featsel.linearlySeparable
PyML.feature_selection.featsel.logOddsRatio
PyML.feature_selection.featsel.nonredundantFeatures
PyML.feature_selection.featsel.oddsRatio
PyML.feature_selection.featsel.parseArgs
PyML.feature_selection.featsel.ppv
PyML.feature_selection.featsel.ppvThreshold
PyML.feature_selection.featsel.predictivity
PyML.feature_selection.featsel.relief
PyML.feature_selection.featsel.roc
PyML.feature_selection.featsel.sensitivity
PyML.feature_selection.featsel.singleFeatureSuccRate
PyML.feature_selection.featsel.specificity
PyML.feature_selection.featsel.succ
PyML.feature_selection.featsel.usefullness
PyML.feature_selection.featsel.weights2ranks
PyML.preproc.preproc.centerColumns
PyML.preproc.preproc.centerRows
PyML.preproc.preproc.corrcoef
PyML.preproc.preproc.corrcoef2
PyML.preproc.preproc.corrcoefij
PyML.preproc.preproc.dmat
PyML.preproc.preproc.maxvar
PyML.preproc.preproc.norm2
PyML.preproc.preproc.normalizeNorm
PyML.preproc.preproc.pca
PyML.preproc.preproc.standardizeColumns
PyML.preproc.preproc.standardizeRows
PyML.preproc.preproc.std
All Variables
PyML.classifiers.KNN
PyML.classifiers.RidgeRegression
PyML.classifiers.SVM
PyML.classifiers.baseClassifiers.containersRequiringProjection
PyML.classifiers.ext.cgist.DoubleVector_swigregister
PyML.classifiers.ext.cgist.IntVector_swigregister
PyML.classifiers.ext.cgist.PySwigIterator_swigregister
PyML.classifiers.ext.cgist.new_instancemethod
PyML.classifiers.ext.cgist.runGist
PyML.classifiers.ext.cgist.runGradientDescent
PyML.classifiers.ext.csmo.DoubleVector_swigregister
PyML.classifiers.ext.csmo.IntVector_swigregister
PyML.classifiers.ext.csmo.PySwigIterator_swigregister
PyML.classifiers.ext.csmo.new_instancemethod
PyML.classifiers.ext.csmo.runSMO
PyML.classifiers.ext.csvmodel.DoubleVector_swigregister
PyML.classifiers.ext.csvmodel.IntVector_swigregister
PyML.classifiers.ext.csvmodel.LinearSVModel_swigregister
PyML.classifiers.ext.csvmodel.LinearSparseSVModel_swigregister
PyML.classifiers.ext.csvmodel.PySwigIterator_swigregister
PyML.classifiers.ext.csvmodel.SVModel_swigregister
PyML.classifiers.ext.csvmodel.new_instancemethod
PyML.classifiers.ext.knn.DoubleVector_swigregister
PyML.classifiers.ext.knn.IntVector_swigregister
PyML.classifiers.ext.knn.KNN_swigregister
PyML.classifiers.ext.knn.PySwigIterator_swigregister
PyML.classifiers.ext.knn.new_instancemethod
PyML.classifiers.ext.libsvm.C_SVC
PyML.classifiers.ext.libsvm.DecisionFunction_swigregister
PyML.classifiers.ext.libsvm.EPSILON_SVR
PyML.classifiers.ext.libsvm.LINEAR
PyML.classifiers.ext.libsvm.NU_SVC
PyML.classifiers.ext.libsvm.NU_SVR
PyML.classifiers.ext.libsvm.ONE_CLASS
PyML.classifiers.ext.libsvm.POLY
PyML.classifiers.ext.libsvm.PRECOMPUTED
PyML.classifiers.ext.libsvm.PySwigIterator_swigregister
PyML.classifiers.ext.libsvm.RBF
PyML.classifiers.ext.libsvm.SIGMOID
PyML.classifiers.ext.libsvm.doubleArray_frompointer
PyML.classifiers.ext.libsvm.doubleArray_swigregister
PyML.classifiers.ext.libsvm.intArray_frompointer
PyML.classifiers.ext.libsvm.intArray_swigregister
PyML.classifiers.ext.libsvm.new_instancemethod
PyML.classifiers.ext.libsvm.svm_node_swigregister
PyML.classifiers.ext.libsvm.svm_parameter_swigregister
PyML.classifiers.ext.libsvm.svm_problem_swigregister
PyML.classifiers.ext.libsvm.svm_train_one_pyml
PyML.classifiers.ext.mylibsvm.libsvm_destroy
PyML.classifiers.ext.mylibsvm.new_instancemethod
PyML.classifiers.svm.containersNotSupported
PyML.containers.Aggregate
PyML.containers.KernelData
PyML.containers.Labels
PyML.containers.PairDataSet
PyML.containers.SequenceData
PyML.containers.SparseDataSet
PyML.containers.VectorDataSet
PyML.containers.ext.caggregate.Aggregate_swigregister
PyML.containers.ext.caggregate.DataSet_swigregister
PyML.containers.ext.caggregate.DoubleVector_swigregister
PyML.containers.ext.caggregate.IntVector_swigregister
PyML.containers.ext.caggregate.PySwigIterator_swigregister
PyML.containers.ext.caggregate.new_instancemethod
PyML.containers.ext.ckernel.COSINE
PyML.containers.ext.ckernel.Cosine_swigregister
PyML.containers.ext.ckernel.DICES
PyML.containers.ext.ckernel.DoubleVector_swigregister
PyML.containers.ext.ckernel.FloatVector_swigregister
PyML.containers.ext.ckernel.Gaussian_swigregister
PyML.containers.ext.ckernel.IntVector_swigregister
PyML.containers.ext.ckernel.KernelMatrix_swigregister
PyML.containers.ext.ckernel.Kernel_swigregister
PyML.containers.ext.ckernel.Linear_swigregister
PyML.containers.ext.ckernel.NONE
PyML.containers.ext.ckernel.Polynomial_swigregister
PyML.containers.ext.ckernel.PySwigIterator_swigregister
PyML.containers.ext.ckernel.TANIMOTO
PyML.containers.ext.ckernel.kernel2file
PyML.containers.ext.ckernel.new_instancemethod
PyML.containers.ext.ckerneldata.DataSet_swigregister
PyML.containers.ext.ckerneldata.DoubleVector_swigregister
PyML.containers.ext.ckerneldata.FloatVector_swigregister
PyML.containers.ext.ckerneldata.IntVector_swigregister
PyML.containers.ext.ckerneldata.KernelData_swigregister
PyML.containers.ext.ckerneldata.PySwigIterator_swigregister
PyML.containers.ext.ckerneldata.new_instancemethod
PyML.containers.ext.cpairdataset.DataSet_swigregister
PyML.containers.ext.cpairdataset.DoubleVector_swigregister
PyML.containers.ext.cpairdataset.IntVector_swigregister
PyML.containers.ext.cpairdataset.PairDataSetOrd_swigregister
PyML.containers.ext.cpairdataset.PairDataSetSum_swigregister
PyML.containers.ext.cpairdataset.PairDataSet_swigregister
PyML.containers.ext.cpairdataset.PySwigIterator_swigregister
PyML.containers.ext.cpairdataset.new_instancemethod
PyML.containers.ext.csequencedata.DataSet_swigregister
PyML.containers.ext.csequencedata.DoubleVector_swigregister
PyML.containers.ext.csequencedata.IntVector_swigregister
PyML.containers.ext.csequencedata.LongVector_swigregister
PyML.containers.ext.csequencedata.PySwigIterator_swigregister
PyML.containers.ext.csequencedata.SequenceData_swigregister
PyML.containers.ext.csequencedata.StringVector_swigregister
PyML.containers.ext.csequencedata.new_instancemethod
PyML.containers.ext.csparsedataset.DataSet_swigregister
PyML.containers.ext.csparsedataset.DoubleVector_swigregister
PyML.containers.ext.csparsedataset.FloatVector_swigregister
PyML.containers.ext.csparsedataset.IntVector_swigregister
PyML.containers.ext.csparsedataset.LongVector_swigregister
PyML.containers.ext.csparsedataset.PySwigIterator_swigregister
PyML.containers.ext.csparsedataset.SparseDataSet_swigregister
PyML.containers.ext.csparsedataset.StringVector_swigregister
PyML.containers.ext.csparsedataset.doubleArray_frompointer
PyML.containers.ext.csparsedataset.doubleArray_swigregister
PyML.containers.ext.csparsedataset.intArray_frompointer
PyML.containers.ext.csparsedataset.intArray_swigregister
PyML.containers.ext.csparsedataset.new_instancemethod
PyML.containers.ext.csparsefeaturevector.Feature_swigregister
PyML.containers.ext.csparsefeaturevector.SparseFeatureVector_swigregister
PyML.containers.ext.csparsefeaturevector.new_instancemethod
PyML.containers.ext.cstringkernel.DoubleVector_swigregister
PyML.containers.ext.cstringkernel.IntVector_swigregister
PyML.containers.ext.cstringkernel.LongVector_swigregister
PyML.containers.ext.cstringkernel.PositionalKmer_swigregister
PyML.containers.ext.cstringkernel.PySwigIterator_swigregister
PyML.containers.ext.cstringkernel.StringKernel_swigregister
PyML.containers.ext.cstringkernel.StringVector_swigregister
PyML.containers.ext.cstringkernel.new_instancemethod
PyML.containers.ext.cvectordataset.DataSet_swigregister
PyML.containers.ext.cvectordataset.DoubleVector_swigregister
PyML.containers.ext.cvectordataset.IntVector_swigregister
PyML.containers.ext.cvectordataset.LongVector_swigregister
PyML.containers.ext.cvectordataset.PySwigIterator_swigregister
PyML.containers.ext.cvectordataset.StringVector_swigregister
PyML.containers.ext.cvectordataset.VectorDataSet_swigregister
PyML.containers.ext.cvectordataset.new_instancemethod
PyML.containers.ker.normalizationMethods
PyML.datagen.toydata.USAGE
PyML.demo.demo.d
PyML.demo.demo.f
PyML.demo.demo.fs
PyML.demo.demo.knn
PyML.demo.demo.m
PyML.demo.demo.mc
PyML.demo.demo.p
PyML.demo.demo.r
PyML.demo.demo.results
PyML.demo.demo.ridge
PyML.demo.demo.rp
PyML.demo.demo.s
PyML.demo.demo2d.X
PyML.demo.demo2d.Y
PyML.demo.demo2d.plotStr
PyML.demo.demo2d.xmax
PyML.demo.demo2d.xmin
PyML.demo.demo2d.ymax
PyML.demo.demo2d.ymin
PyML.demo.pyml_test.heartdatafile
PyML.demo.pyml_test.irisdatafile
PyML.demo.pyml_test.yeastdatafile
PyML.demo.test.container
PyML.demo.test.heartdatafile
PyML.demo.test.irisdatafile
PyML.demo.test.yeastdatafile
PyML.preproc.Standardizer