RaggedExperiment-package	RaggedExperiment-package
$,RaggedExperiment-method	RaggedExperiment-class
as.data.frame,RaggedExperiment-method	RaggedExperiment-class
as.list,RaggedExperiment-method	RaggedExperiment-class
assay,RaggedExperiment,ANY-method	RaggedExperiment-class
assay,RaggedExperiment,missing-method	RaggedExperiment-class
assay-functions	assay-functions
assayNames,RaggedExperiment-method	RaggedExperiment-class
assays,RaggedExperiment-method	RaggedExperiment-class
class:RaggedExperiment	RaggedExperiment-class
coerce,dgCMatrix,RaggedExperiment-method	coerce-functions
coerce,GRangesList,RaggedExperiment-method	RaggedExperiment-class
coerce,RaggedExperiment,GRangesList-method	RaggedExperiment-class
coerce-RaggedExperiment	coerce-functions
colData,RaggedExperiment-method	RaggedExperiment-class
colData<-,RaggedExperiment,DataFrame-method	RaggedExperiment-class
compactAssay	assay-functions
compactSummarizedExperiment	coerce-functions
dim,RaggedExperiment-method	RaggedExperiment-class
dimnames,RaggedExperiment-method	RaggedExperiment-class
dimnames<-,RaggedExperiment,ANY-method	RaggedExperiment-class
dimnames<-,RaggedExperiment,list-method	RaggedExperiment-class
disjoinAssay	assay-functions
disjoinSummarizedExperiment	coerce-functions
length,RaggedExperiment-method	RaggedExperiment-class
mcols,RaggedExperiment-method	RaggedExperiment-class
mcols<-,RaggedExperiment-method	RaggedExperiment-class
overlapsAny,RaggedExperiment,Vector-method	RaggedExperiment-class
qreduceAssay	assay-functions
qreduceSummarizedExperiment	coerce-functions
RaggedExperiment	RaggedExperiment-class
RaggedExperiment-class	RaggedExperiment-class
rowData,RaggedExperiment-method	RaggedExperiment-class
rowData<-,RaggedExperiment-method	RaggedExperiment-class
rowRanges,RaggedExperiment-method	RaggedExperiment-class
rowRanges<-,RaggedExperiment,GRanges-method	RaggedExperiment-class
seqinfo,RaggedExperiment-method	RaggedExperiment-class
seqinfo<-,RaggedExperiment-method	RaggedExperiment-class
show,RaggedExperiment-method	RaggedExperiment-class
sparseAssay	assay-functions
sparseSummarizedExperiment	coerce-functions
subset,RaggedExperiment-method	RaggedExperiment-class
subsetByOverlaps,RaggedExperiment,Vector-method	RaggedExperiment-class
[,RaggedExperiment,ANY,ANY,ANY-method	RaggedExperiment-class
